- io500
-
#!/bin/bash
#
# INSTRUCTIONS:
# Edit this file as needed for your machine.
# This simplified version is just for running on a single node.
# It is a simplified version of the site-configs/sandia/startup.sh which include SLURM directives.
# Most of the variables set in here are needed for io500_fixed.sh which gets sourced at the end of this.
# Please also edit 'extra_description' function.
#set -x
if [ "$1" == "" ]
then
SCALE=1
else
SCALE=$1
fi
NP=$(( $SCALE * 16 ))
echo "$SCALE processes per node for $NP processes."
set -euo pipefail # better error handling
export OFS_MOUNT=/scratch1b/jburto2
# turn these to True successively while you debug and tune this benchmark.
# for each one that you turn to true, go and edit the appropriate function.
# to find the function name, see the 'main' function.
# These are listed in the order that they run.
io500_run_ior_easy="True" # does the write phase and enables the subsequent read
io500_run_md_easy="True" # does the creat phase and enables the subsequent stat
io500_run_ior_hard="True" # does the write phase and enables the subsequent read
io500_run_md_hard="True" # does the creat phase and enables the subsequent read
io500_run_find="True"
io500_run_ior_easy_read="True"
io500_run_md_easy_stat="True"
io500_run_ior_hard_read="True"
io500_run_md_hard_stat="True"
io500_run_md_hard_read="True"
io500_run_md_easy_delete="True" # turn this off if you want to just run find by itself
io500_run_md_hard_delete="True" # turn this off if you want to just run find by itself
io500_run_mdreal="True" # this one is optional
io500_cleanup_workdir="False" # this flag is currently ignored. You'll need to clean up your data files manually if you want to.
io500_stonewall_timer=300 # Stonewalling timer, stop with wearout after 300s with default test, set to 0, if you never want to abort...
# to run this benchmark, find and edit each of these functions.
# please also edit 'extra_description' function to help us collect the required data.
function main {
setup_directories
setup_paths
setup_ior_easy # required if you want a complete score
setup_ior_hard # required if you want a complete score
setup_mdt_easy # required if you want a complete score
setup_mdt_hard # required if you want a complete score
setup_find # required if you want a complete score
setup_mdreal # optional
run_benchmarks
}
function setup_directories {
# set directories for where the benchmark files are created and where the results will go.
# If you want to set up stripe tuning on your output directories or anything similar, then this is good place to do it.
timestamp=`date +%Y.%m.%d-%H.%M.%S` # create a uniquifier
io500_workdir=$OFS_MOUNT/io500/datafiles/io500.$timestamp # directory where the data will be stored
io500_result_dir=$PWD/results/$timestamp # the directory where the output results will be kept
mkdir -p $io500_workdir $io500_result_dir
mkdir -p ${io500_workdir}/ior_easy ${io500_workdir}/ior_hard
mkdir -p ${io500_workdir}/mdt_easy ${io500_workdir}/mdt_hard
# for ior_easy 1 targets. RAID stripe is 8 x 64kk = 2048k
beegfs-ctl --setpattern --numtargets=1 --chunksize=2048k --mount=/scratch1b ${io500_workdir}/ior_easy
# stripe across all OSTs for ior_hard, 512k chunksize
beegfs-ctl --setpattern --numtargets=16 --chunksize=64k --mount=/scratch1b ${io500_workdir}/ior_hard
# turn off striping and use small chunks for mdtest
beegfs-ctl --setpattern --numtargets=1 --chunksize=64k --mount=/scratch1b ${io500_workdir}/mdt_easy
beegfs-ctl --setpattern --numtargets=1 --chunksize=64k --mount=/scratch1b ${io500_workdir}/mdt_hard
}
function setup_paths {
# Set the paths to the binaries. If you ran ./utilities/prepare.sh successfully, then binaries are in ./bin/
io500_ior_cmd=$PWD/bin/ior
io500_mdtest_cmd=$PWD/bin/mdtest
io500_mdreal_cmd=$PWD/bin/md-real-io
io500_mpi_prefix="/usr/lib64/openmpi"
io500_mpi_prefix="/home/jburto2/openmpi/1.10.7"
io500_mpi_prefix="/software/openmpi/1.10.7_gcc"
io500_mpirun="$io500_mpi_prefix/bin/mpirun"
io500_mpienv="-x LD_LIBRARY_PATH=/opt/pbs/14.0.1-2cu/lib:/opt/orangefs/lib"
# Run OpenMPI over ethernet to keep the IB network clear for data. Map by node to balance processes.
# The I/O 500 benchmarks are not heavy on interprocess communication.
#io500_mpiargs="-np $NP --mca btl_tcp_if_exclude ib0 --mca btl ^openib --map-by node --machinefile /home/jburto2/hpccnodelistmpi --prefix $io500_mpi_prefix"
io500_mpiargs="-np $NP ${io500_mpienv} --mca mpi_cuda_support 0 --map-by node --machinefile /home/jburto2/phase08cmpi --prefix $io500_mpi_prefix"
}
function setup_ior_easy {
# 2M writes, 128 GB per proc, file per proc.
io500_ior_easy_size=$((128 * 1024 / $SCALE))
io500_ior_easy_params="-t 2m -b ${io500_ior_easy_size}m -F -a MPIIO"
}
function setup_mdt_easy {
# one level, 11 directories, unique dir per thread, files only at leaves.
# BeeGFS doesn't have distributed directories, so more directories = better distribution.
io500_mdtest_easy_params="-u -L"
io500_mdtest_easy_files_per_proc=800000
}
function setup_ior_hard {
if [ "$SCALE" == "1" ]
then
# One process per node is significantly faster because of buffering.
io500_ior_hard_writes_per_proc=2000000
else
io500_ior_hard_writes_per_proc=$(( 2000000 / $SCALE ))
fi
io500_ior_hard_other_options=" -a POSIX"
}
function setup_mdt_hard {
# Multiple directories might improve mdt_hard slightly, but this test is storage bound, not md bound.
io500_mdtest_hard_files_per_proc="$(( 150000 / $SCALE ))"
io500_mdtest_files_per_proc=$(( 150000 / $SCALE ))
io500_mdtest_hard_other_options=""
}
function setup_find {
#
# setup the find command. This is an area where innovation is allowed.
# There are three default options provided. One is a serial find, one is python
# parallel version, one is C parallel version. Current default is to use serial.
# But it is very slow. We recommend to either customize or use the C parallel version.
# For GPFS, we recommend to use the provided mmfind wrapper described below.
# Instructions below.
# If a custom approach is used, please provide enough info so others can reproduce.
# the serial version that should run (SLOWLY) without modification
#io500_find_mpi="False"
#io500_find_cmd=$PWD/bin/sfind.sh
#io500_find_cmd_args=""
# a parallel version in C, the -s adds a stonewall
# for a real run, turn -s (stonewall) off or set it at 300 or more
# to prepare this (assuming you've run ./utilities/prepare.sh already):
# > cd build/pfind
# > ./prepare.sh
# > ./compile.sh
# > cp pfind ../../bin/
# If you use io500_find_mpi="True", then this will run with the same
# number of MPI nodes and ranks as the other phases.
# If you prefer another number, and fewer might be better here,
# Then you can set io500_find_mpi to be "False" and write a wrapper
# script for this which sets up MPI as you would like. Then change
# io500_find_cmd to point to your wrapper script.
io500_find_mpi="True"
io500_find_cmd="$PWD/bin/pfind"
io500_find_cmd_args="-s 10000 -r $io500_result_dir/pfind_results"
# for GPFS systems, you should probably use the provided mmfind wrapper
# if you used ./utilities/prepare.sh, you'll find this wrapper in ./bin/mmfind.sh
#io500_find_mpi="False"
#io500_find_cmd="$PWD/bin/mmfind.sh"
#io500_find_cmd_args=""
}
function setup_mdreal {
io500_mdreal_params="-P=5000 -I=1000"
}
function run_benchmarks {
# Important: source the io500_fixed.sh script. Do not change it. If you discover
# a need to change it, please email the mailing list to discuss
source ./bin/io500_fixed.sh 2>&1 | tee $io500_result_dir/io-500-summary.$timestamp.txt
}
# Add key/value pairs defining your system
# Feel free to add extra ones if you'd like
function extra_description {
# top level info
io500_info_system_name='Palmetto scratch1b' # e.g. Oakforest-PACS
io500_info_institute_name='Clemson University' # e.g. JCAHPC
io500_info_storage_age_in_months='0' # not install date but age since last refresh
io500_info_storage_install_date='09/12' # MM/YY
io500_info_filesysem='BeeGFS' # e.g. BeeGFS, DataWarp, GPFS, IME, Lustre
io500_info_filesystem_version='7.1'
# client side info
io500_info_num_client_nodes='16'
io500_info_procs_per_node="${SCALE}"
# server side info
io500_info_num_metadata_server_nodes='16'
io500_info_num_data_server_nodes='16'
io500_info_num_data_storage_devices='32' # if you have 5 data servers, and each has 5 drives, then this number is 25
io500_info_num_metadata_storage_devices='160' # if you have 2 metadata servers, and each has 5 drives, then this number is 10
io500_info_data_storage_type='HDD' # HDD, SSD, persistent memory, etc, feel free to put specific models
io500_info_metadata_storage_type='SSD' # HDD, SSD, persistent memory, etc, feel free to put specific models
io500_info_storage_network='ethernet' # infiniband, omnipath, ethernet, etc
io500_info_storage_interface='SAS' # SAS, SATA, NVMe, etc
# miscellaneous
io500_info_whatever='production'
}
main
- ior_easy_read
-
[node0046.palmetto.clemson.edu:82233] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:05377] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:60611] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:12954] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:115780] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:10290] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:111863] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:03038] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:33012] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:36420] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:115758] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:06732] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:73819] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:03704] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:80638] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:58344] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:48114] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:20037] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:51063] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:14522] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:117999] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:68723] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:87708] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:51166] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:27978] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:23661] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:96962] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:104080] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:46616] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:104979] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:82120] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:16038] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:40789] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:37738] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:64983] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:118324] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:100514] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:117786] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:76849] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:08532] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:43240] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:116574] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:71643] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:98969] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:101875] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:06097] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:44703] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:87179] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
IOR-3.2.0: MPI Coordinated Test of Parallel I/O
Began : Mon Oct 22 15:58:59 2018
Command line : /home/jburto2/io-500-dev/bin/ior -r -R -C -Q 1 -g -G 27 -k -e -t 2m -b 43690m -F -a MPIIO -o /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_easy/ior_file_easy -O stoneWallingStatusFile=/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_easy/stonewall
Machine : Linux node0046.palmetto.clemson.edu
TestID : 0
StartTime : Mon Oct 22 15:58:59 2018
Path : /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_easy
FS : 232.8 TiB Used FS: 20.5% Inodes: 0.0 Mi Used Inodes: -nan%
Options:
api : MPIIO
apiVersion : (3.0)
test filename : /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_easy/ior_file_easy
access : file-per-process
type : independent
segments : 1
ordering in a file : sequential
ordering inter file : constant task offset
task offset : 1
tasks : 48
clients per node : 1
repetitions : 1
xfersize : 2 MiB
blocksize : 42.67 GiB
aggregate filesize : 2.00 TiB
Results:
access bw(MiB/s) block(KiB) xfer(KiB) open(s) wr/rd(s) close(s) total(s) iter
------ --------- ---------- --------- -------- -------- -------- -------- ----
WARNING: Expected aggregate file size = 2198989701120.
WARNING: Stat() of aggregate file size = 1533605314560.
WARNING: Using actual aggregate bytes moved = 1533605314560.
read 3142.61 44738560 2048.00 0.011180 465.36 0.025057 465.40 0
Max Read: 3142.61 MiB/sec (3295.27 MB/sec)
Summary of all tests:
Operation Max(MiB) Min(MiB) Mean(MiB) StdDev Max(OPs) Min(OPs) Mean(OPs) StdDev Mean(s) Test# #Tasks tPN reps fPP reord reordoff reordrand seed segcnt blksiz xsize aggs(MiB) API RefNum
read 3142.61 3142.61 3142.61 0.00 1571.31 1571.31 1571.31 0.00 465.39618 0 48 1 1 1 1 1 0 0 1 45812285440 2097152 1462560.0 MPIIO 0
Finished : Mon Oct 22 16:06:44 2018
- ior_easy_write
-
[node1878.palmetto.clemson.edu:02070] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:114816] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0046.palmetto.clemson.edu:81201] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:57298] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:32066] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:116846] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:22702] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:11983] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:36793] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:35368] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:09249] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:116942] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:02735] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:42292] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:104037] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:115629] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:04431] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:110941] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:13567] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:79692] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:114852] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:86237] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:75901] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:07524] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:05123] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:15029] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:39839] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:67776] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:05786] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:117356] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:19030] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:100928] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:99565] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:63953] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:59665] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:86757] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:95860] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:43748] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:26966] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:72768] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:103141] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:81174] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:98022] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:70631] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:47158] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:50220] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:45660] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:50004] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
IOR-3.2.0: MPI Coordinated Test of Parallel I/O
Began : Mon Oct 22 15:05:48 2018
Command line : /home/jburto2/io-500-dev/bin/ior -w -C -Q 1 -g -G 27 -k -e -t 2m -b 43690m -F -a MPIIO -o /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_easy/ior_file_easy -O stoneWallingStatusFile=/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_easy/stonewall -O stoneWallingWearOut=1 -D 300
Machine : Linux node0046.palmetto.clemson.edu
TestID : 0
StartTime : Mon Oct 22 15:05:48 2018
Path : /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_easy
FS : 232.8 TiB Used FS: 19.3% Inodes: 0.0 Mi Used Inodes: -nan%
Options:
api : MPIIO
apiVersion : (3.0)
test filename : /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_easy/ior_file_easy
access : file-per-process
type : independent
segments : 1
ordering in a file : sequential
ordering inter file : constant task offset
task offset : 1
tasks : 48
clients per node : 1
repetitions : 1
xfersize : 2 MiB
blocksize : 42.67 GiB
aggregate filesize : 2.00 TiB
stonewallingTime : 300
stoneWallingWearOut : 1
Results:
access bw(MiB/s) block(KiB) xfer(KiB) open(s) wr/rd(s) close(s) total(s) iter
------ --------- ---------- --------- -------- -------- -------- -------- ----
stonewalling pairs accessed min: 14607 max: 15235 -- min data: 28.5 GiB mean data: 28.8 GiB time: 300.0s
WARNING: Expected aggregate file size = 2198989701120.
WARNING: Stat() of aggregate file size = 1533605314560.
WARNING: Using actual aggregate bytes moved = 1533605314560.
WARNING: maybe caused by deadlineForStonewalling
write 4536 44738560 2048.00 0.013768 322.43 0.009461 322.45 0
Max Write: 4535.76 MiB/sec (4756.08 MB/sec)
Summary of all tests:
Operation Max(MiB) Min(MiB) Mean(MiB) StdDev Max(OPs) Min(OPs) Mean(OPs) StdDev Mean(s) Test# #Tasks tPN reps fPP reord reordoff reordrand seed segcnt blksiz xsize aggs(MiB) API RefNum
write 4535.76 4535.76 4535.76 0.00 2267.88 2267.88 2267.88 0.00 322.45126 0 48 1 1 1 1 1 0 0 1 45812285440 2097152 1462560.0 MPIIO 0
Finished : Mon Oct 22 15:11:11 2018
- ior_hard_read
-
[node0046.palmetto.clemson.edu:82607] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:112213] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:51430] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:06402] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:36748] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:04020] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:118093] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:13272] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:58672] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:03391] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:104419] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:24006] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:46960] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:33352] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:82428] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:88048] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:80981] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:43583] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:60922] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:116095] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:20398] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:10663] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:118674] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:116096] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:74185] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:105287] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:07138] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:100856] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:116916] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:77192] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:51507] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:45048] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:38078] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:28282] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:08840] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:05717] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:41130] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:118360] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:48422] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:102183] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:16379] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:65349] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:71985] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:97287] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:87486] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:69062] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:99311] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:14863] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
IOR-3.2.0: MPI Coordinated Test of Parallel I/O
Began : Mon Oct 22 16:10:58 2018
Command line : /home/jburto2/io-500-dev/bin/ior -r -R -C -Q 1 -g -G 27 -k -e -t 47008 -b 47008 -s 666666 -a POSIX -o /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_hard/IOR_file -O stoneWallingStatusFile=/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_hard/stonewall
Machine : Linux node0046.palmetto.clemson.edu
TestID : 0
StartTime : Mon Oct 22 16:10:58 2018
Path : /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_hard
FS : 232.8 TiB Used FS: 20.5% Inodes: 0.0 Mi Used Inodes: -nan%
Options:
api : POSIX
apiVersion :
test filename : /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_hard/IOR_file
access : single-shared-file
type : independent
segments : 666666
ordering in a file : sequential
ordering inter file : constant task offset
task offset : 1
tasks : 48
clients per node : 1
repetitions : 1
xfersize : 47008 bytes
blocksize : 47008 bytes
aggregate filesize : 1.37 TiB
Results:
access bw(MiB/s) block(KiB) xfer(KiB) open(s) wr/rd(s) close(s) total(s) iter
------ --------- ---------- --------- -------- -------- -------- -------- ----
WARNING: Expected aggregate file size = 1504254495744.
WARNING: Stat() of aggregate file size = 1441739120640.
WARNING: Using actual aggregate bytes moved = 1441739120640.
read 1428.43 45.91 45.91 0.013729 962.53 0.019933 962.56 0
Max Read: 1428.43 MiB/sec (1497.82 MB/sec)
Summary of all tests:
Operation Max(MiB) Min(MiB) Mean(MiB) StdDev Max(OPs) Min(OPs) Mean(OPs) StdDev Mean(s) Test# #Tasks tPN reps fPP reord reordoff reordrand seed segcnt blksiz xsize aggs(MiB) API RefNum
read 1428.43 1428.43 1428.43 0.00 31863.01 31863.01 31863.01 0.00 962.56080 0 48 1 1 0 1 1 0 0 666666 47008 47008 1374949.6 POSIX 0
Finished : Mon Oct 22 16:27:01 2018
- ior_hard_write
-
[node0121.palmetto.clemson.edu:115016] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:04622] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:12183] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:09458] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:81367] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:57510] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:15284] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:104229] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:32256] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:05338] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:02933] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:27222] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:05978] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:40029] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:35591] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:111139] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:115043] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0046.palmetto.clemson.edu:81427] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:103333] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:45854] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:117036] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:13759] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:22897] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:59857] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:72982] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:02277] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:86950] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:76094] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:117553] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:86427] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:50410] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:115822] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:117157] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:99754] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:36982] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:96079] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:50227] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:79887] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:43944] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:101117] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:19206] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:98213] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:47350] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:42484] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:64162] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:70825] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:67968] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:07717] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
IOR-3.2.0: MPI Coordinated Test of Parallel I/O
Began : Mon Oct 22 15:17:42 2018
Command line : /home/jburto2/io-500-dev/bin/ior -w -C -Q 1 -g -G 27 -k -e -t 47008 -b 47008 -s 666666 -a POSIX -o /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_hard/IOR_file -O stoneWallingStatusFile=/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_hard/stonewall -O stoneWallingWearOut=1 -D 300
Machine : Linux node0046.palmetto.clemson.edu
TestID : 0
StartTime : Mon Oct 22 15:17:42 2018
Path : /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_hard
FS : 232.8 TiB Used FS: 19.9% Inodes: 0.0 Mi Used Inodes: -nan%
Options:
api : POSIX
apiVersion :
test filename : /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/ior_hard/IOR_file
access : single-shared-file
type : independent
segments : 666666
ordering in a file : sequential
ordering inter file : constant task offset
task offset : 1
tasks : 48
clients per node : 1
repetitions : 1
xfersize : 47008 bytes
blocksize : 47008 bytes
aggregate filesize : 1.37 TiB
stonewallingTime : 300
stoneWallingWearOut : 1
Results:
access bw(MiB/s) block(KiB) xfer(KiB) open(s) wr/rd(s) close(s) total(s) iter
------ --------- ---------- --------- -------- -------- -------- -------- ----
stonewalling pairs accessed min: 638953 max: 638960 -- min data: 28.0 GiB mean data: 28.0 GiB time: 300.0s
WARNING: Expected aggregate file size = 1504254495744.
WARNING: Stat() of aggregate file size = 1441739120640.
WARNING: Using actual aggregate bytes moved = 1441739120640.
WARNING: maybe caused by deadlineForStonewalling
write 4001 45.91 45.91 0.015626 343.62 0.010490 343.64 0
Max Write: 4001.11 MiB/sec (4195.47 MB/sec)
Summary of all tests:
Operation Max(MiB) Min(MiB) Mean(MiB) StdDev Max(OPs) Min(OPs) Mean(OPs) StdDev Mean(s) Test# #Tasks tPN reps fPP reord reordoff reordrand seed segcnt blksiz xsize aggs(MiB) API RefNum
write 4001.11 4001.11 4001.11 0.00 89250.08 89250.08 89250.08 0.00 343.64203 0 48 1 1 0 1 1 0 0 666666 47008 47008 1374949.6 POSIX 0
Finished : Mon Oct 22 15:23:26 2018
- mdtest_easy_delete
-
[node0046.palmetto.clemson.edu:82829] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:05910] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:10888] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:58896] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:04255] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:61148] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:06635] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:33545] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:13506] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:41325] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:16572] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:116331] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:105479] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:81174] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:112416] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:74408] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:47159] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:51667] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:43783] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:82620] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:116291] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:28510] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:24204] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:101051] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:88243] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:07334] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:118584] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:38272] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:118875] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:69256] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:45248] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:36980] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:03587] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:65563] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:20615] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:51702] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:48650] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:104615] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:15061] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:97545] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:118318] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:87710] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:99506] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:09067] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:72179] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:77385] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:117112] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:102376] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
-- started at 10/22/2018 16:27:26 --
mdtest-1.9.3 was launched with 48 total task(s) on 48 node(s)
Command line used: /home/jburto2/io-500-dev/bin/mdtest "-r" "-F" "-d" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_easy" "-n" "800000" "-u" "-L" "-x" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_easy-stonewall"
Path: /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46
FS: 232.8 TiB Used FS: 20.5% Inodes: 0.0 Mi Used Inodes: -nan%
48 tasks, 38400000 files
SUMMARY rate: (of 1 iterations)
Operation Max Min Mean Std Dev
--------- --- --- ---- -------
File creation : 0.000 0.000 0.000 0.000
File stat : 0.000 0.000 0.000 0.000
File read : 0.000 0.000 0.000 0.000
File removal : 60608.740 60608.740 60608.740 0.000
Tree creation : 0.000 0.000 0.000 0.000
Tree removal : 0.213 0.213 0.213 0.000
-- finished at 10/22/2018 16:33:09 --
- mdtest_easy_stat
-
[node1113.palmetto.clemson.edu:05540] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:115949] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:13122] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:03872] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0046.palmetto.clemson.edu:82413] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:33175] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:80802] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:58520] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:06260] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:48276] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:51248] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:28140] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:112066] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:73996] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:16202] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:97134] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:10476] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:115953] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:118491] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:117950] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:60778] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:03214] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:23829] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:14687] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:82284] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:116740] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:100680] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:36603] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:06931] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:44868] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:105146] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:40950] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:87343] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:77015] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:46780] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:71808] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:37903] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:102041] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:118173] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:65163] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:104243] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:20245] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:99133] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:51330] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:43405] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:08697] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:68886] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:87871] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
-- started at 10/22/2018 16:07:01 --
mdtest-1.9.3 was launched with 48 total task(s) on 48 node(s)
Command line used: /home/jburto2/io-500-dev/bin/mdtest "-T" "-F" "-d" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_easy" "-n" "800000" "-u" "-L" "-x" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_easy-stonewall"
Path: /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46
FS: 232.8 TiB Used FS: 20.5% Inodes: 0.0 Mi Used Inodes: -nan%
48 tasks, 38400000 files
SUMMARY rate: (of 1 iterations)
Operation Max Min Mean Std Dev
--------- --- --- ---- -------
File creation : 0.000 0.000 0.000 0.000
File stat : 87089.038 87089.038 87089.038 0.000
File read : 0.000 0.000 0.000 0.000
File removal : 0.000 0.000 0.000 0.000
Tree creation : 0.000 0.000 0.000 0.000
Tree removal : 0.000 0.000 0.000 0.000
-- finished at 10/22/2018 16:10:56 --
- mdtest_easy_write
-
[node0139.palmetto.clemson.edu:12165] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0046.palmetto.clemson.edu:81401] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:15208] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:35522] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:57452] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:09436] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:02264] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:79873] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:104181] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:43929] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:04609] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:32244] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:42470] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:114995] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:45838] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:72957] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:05319] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:59843] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:40016] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:116990] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:114998] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:99741] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:115809] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:86937] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:111087] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:117134] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:117537] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:103320] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:50202] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:19184] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:36968] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:02919] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:27145] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:64141] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:81319] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:76081] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:96049] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:50398] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:47335] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:86380] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:67955] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:101070] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:05930] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:22882] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:98198] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:13745] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:07702] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:70811] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
-- started at 10/22/2018 15:11:28 --
mdtest-1.9.3 was launched with 48 total task(s) on 48 node(s)
Command line used: /home/jburto2/io-500-dev/bin/mdtest "-C" "-F" "-d" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_easy" "-n" "800000" "-u" "-L" "-x" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_easy-stonewall" "-W" "300"
Path: /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46
FS: 232.8 TiB Used FS: 19.9% Inodes: 0.0 Mi Used Inodes: -nan%
48 tasks, 38400000 files
stonewall rank 2: 365899 of 426296
stonewall rank 1: 367920 of 426296
Continue stonewall hit min: 345019 max: 426296 avg: 369700.9
stonewall rank 0: 363924 of 426296
stonewall rank 6: 364395 of 426296
stonewall rank 33: 384923 of 426296
stonewall rank 4: 353476 of 426296
stonewall rank 8: 352472 of 426296
stonewall rank 10: 383260 of 426296
stonewall rank 3: 348641 of 426296
stonewall rank 32: 364769 of 426296
stonewall rank 12: 377759 of 426296
stonewall rank 16: 372395 of 426296
stonewall rank 34: 362693 of 426296
stonewall rank 5: 380880 of 426296
stonewall rank 28: 359145 of 426296
stonewall rank 24: 351281 of 426296
stonewall rank 14: 355972 of 426296
stonewall rank 7: 374958 of 426296
stonewall rank 20: 380476 of 426296
stonewall rank 40: 377826 of 426296
stonewall rank 9: 381592 of 426296
stonewall rank 36: 358481 of 426296
stonewall rank 13: 350032 of 426296
stonewall rank 11: 387028 of 426296
stonewall rank 44: 379229 of 426296
stonewall rank 18: 379020 of 426296
stonewall rank 17: 378190 of 426296
stonewall rank 22: 378744 of 426296
stonewall rank 37: 376400 of 426296
stonewall rank 38: 388604 of 426296
stonewall rank 35: 362143 of 426296
stonewall rank 26: 365122 of 426296
stonewall rank 21: 362761 of 426296
stonewall rank 30: 345019 of 426296
stonewall rank 15: 378908 of 426296
stonewall rank 42: 382297 of 426296
stonewall rank 25: 379974 of 426296
stonewall rank 46: 355382 of 426296
stonewall rank 29: 353319 of 426296
stonewall rank 45: 381085 of 426296
stonewall rank 41: 347841 of 426296
stonewall rank 23: 367509 of 426296
stonewall rank 39: 352936 of 426296
stonewall rank 43: 347606 of 426296
stonewall rank 19: 373442 of 426296
stonewall rank 27: 381777 of 426296
stonewall rank 31: 381842 of 426296
SUMMARY rate: (of 1 iterations)
Operation Max Min Mean Std Dev
--------- --- --- ---- -------
File creation : 103110.190 103110.190 103110.190 0.000
File stat : 0.000 0.000 0.000 0.000
File read : 0.000 0.000 0.000 0.000
File removal : 0.000 0.000 0.000 0.000
Tree creation : 7.210 7.210 7.210 0.000
Tree removal : 0.000 0.000 0.000 0.000
-- finished at 10/22/2018 15:17:40 --
- mdtest_hard_delete
-
[node0121.palmetto.clemson.edu:116534] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:06108] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:11099] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:13711] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:97750] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:82851] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:41521] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:51879] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:03780] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:61344] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:105711] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:104810] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:74629] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:33803] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:47359] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:28706] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:88438] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0046.palmetto.clemson.edu:83050] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:06832] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:38466] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:15260] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:81369] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:59150] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:20827] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:37228] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:112649] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:119075] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:48846] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:04460] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:24410] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:99702] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:45445] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:102607] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:65766] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:16770] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:07561] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:116522] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:87906] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:118798] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:51895] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:69449] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:09267] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:101248] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:77579] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:43980] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:118515] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:72373] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:117306] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
-- started at 10/22/2018 16:34:41 --
mdtest-1.9.3 was launched with 48 total task(s) on 48 node(s)
Command line used: /home/jburto2/io-500-dev/bin/mdtest "-r" "-t" "-F" "-w" "3901" "-e" "3901" "-d" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_hard" "-n" "50000" "-x" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_hard-stonewall"
Path: /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46
FS: 232.8 TiB Used FS: 20.5% Inodes: 0.0 Mi Used Inodes: -nan%
48 tasks, 2400000 files
SUMMARY rate: (of 1 iterations)
Operation Max Min Mean Std Dev
--------- --- --- ---- -------
File creation : 0.000 0.000 0.000 0.000
File stat : 0.000 0.000 0.000 0.000
File read : 0.000 0.000 0.000 0.000
File removal : 5376.301 5376.301 5376.301 0.000
Tree creation : 0.000 0.000 0.000 0.000
Tree removal : 1.160 1.160 1.160 0.000
-- finished at 10/22/2018 16:37:24 --
- mdtest_hard_read
-
[node0046.palmetto.clemson.edu:83027] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:116519] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:04443] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:13696] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:101237] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:41508] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:61330] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:59126] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:48833] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:117295] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:105698] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:81359] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:65755] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:118503] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:74615] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:51865] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:16757] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:06819] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:112635] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:09252] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:03770] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:37212] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:33791] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:82840] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:47344] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:102595] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:28695] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:38457] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:118784] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:11080] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:07548] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:97738] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:119061] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:24392] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:06096] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:69439] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:20809] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:104799] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:88425] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:87895] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:116509] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:15248] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:77568] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:51885] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:72361] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:45432] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:43966] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:99690] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
-- started at 10/22/2018 16:33:25 --
mdtest-1.9.3 was launched with 48 total task(s) on 48 node(s)
Command line used: /home/jburto2/io-500-dev/bin/mdtest "-E" "-t" "-F" "-w" "3901" "-e" "3901" "-d" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_hard" "-n" "50000" "-x" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_hard-stonewall"
Path: /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46
FS: 232.8 TiB Used FS: 20.5% Inodes: 0.0 Mi Used Inodes: -nan%
48 tasks, 2400000 files
SUMMARY rate: (of 1 iterations)
Operation Max Min Mean Std Dev
--------- --- --- ---- -------
File creation : 0.000 0.000 0.000 0.000
File stat : 0.000 0.000 0.000 0.000
File read : 11880.514 11880.514 11880.514 0.000
File removal : 0.000 0.000 0.000 0.000
Tree creation : 0.000 0.000 0.000 0.000
Tree removal : 0.000 0.000 0.000 0.000
-- finished at 10/22/2018 16:34:39 --
- mdtest_hard_stat
-
[node0175.palmetto.clemson.edu:58881] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:05899] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:06621] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:13489] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:116315] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:82609] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:16560] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:04241] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:07322] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:61136] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:09055] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:81163] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:10877] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:116277] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:03574] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:47144] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:74395] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:51652] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:36967] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:105468] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:118571] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:24191] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:112401] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:45233] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:33534] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:38260] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:88230] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:118859] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:43770] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:118306] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:41313] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:101040] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:28497] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:102364] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:87699] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:51690] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:65553] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:15048] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:97526] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:104603] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:99494] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:77372] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0046.palmetto.clemson.edu:82806] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:48638] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:69244] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:20605] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:72168] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:117099] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
-- started at 10/22/2018 16:27:02 --
mdtest-1.9.3 was launched with 48 total task(s) on 48 node(s)
Command line used: /home/jburto2/io-500-dev/bin/mdtest "-T" "-t" "-F" "-w" "3901" "-e" "3901" "-d" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_hard" "-n" "50000" "-x" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_hard-stonewall"
Path: /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46
FS: 232.8 TiB Used FS: 20.5% Inodes: 0.0 Mi Used Inodes: -nan%
48 tasks, 2400000 files
SUMMARY rate: (of 1 iterations)
Operation Max Min Mean Std Dev
--------- --- --- ---- -------
File creation : 0.000 0.000 0.000 0.000
File stat : 38780.519 38780.519 38780.519 0.000
File read : 0.000 0.000 0.000 0.000
File removal : 0.000 0.000 0.000 0.000
Tree creation : 0.000 0.000 0.000 0.000
Tree removal : 0.000 0.000 0.000 0.000
-- finished at 10/22/2018 16:27:25 --
- mdtest_hard_write
-
[node0046.palmetto.clemson.edu:81589] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1881.palmetto.clemson.edu:45999] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0175.palmetto.clemson.edu:57668] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1810.palmetto.clemson.edu:111285] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1189.palmetto.clemson.edu:05486] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0121.palmetto.clemson.edu:115164] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0139.palmetto.clemson.edu:12339] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1822.palmetto.clemson.edu:32401] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1868.palmetto.clemson.edu:15427] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1821.palmetto.clemson.edu:09610] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1814.palmetto.clemson.edu:60000] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1830.palmetto.clemson.edu:13903] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1878.palmetto.clemson.edu:02422] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1805.palmetto.clemson.edu:73144] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1815.palmetto.clemson.edu:47497] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1113.palmetto.clemson.edu:04766] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1873.palmetto.clemson.edu:115965] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1882.palmetto.clemson.edu:44089] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1825.palmetto.clemson.edu:87093] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1823.palmetto.clemson.edu:104370] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1831.palmetto.clemson.edu:64315] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1875.palmetto.clemson.edu:99899] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1827.palmetto.clemson.edu:27367] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1816.palmetto.clemson.edu:06123] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1824.palmetto.clemson.edu:37126] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1872.palmetto.clemson.edu:42628] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1819.palmetto.clemson.edu:68112] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1826.palmetto.clemson.edu:19393] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1880.palmetto.clemson.edu:103474] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1806.palmetto.clemson.edu:117702] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0200.palmetto.clemson.edu:35747] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1818.palmetto.clemson.edu:101262] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1883.palmetto.clemson.edu:117320] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1808.palmetto.clemson.edu:03082] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1870.palmetto.clemson.edu:80029] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1869.palmetto.clemson.edu:117179] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0653.palmetto.clemson.edu:86570] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1877.palmetto.clemson.edu:98357] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1874.palmetto.clemson.edu:81510] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1871.palmetto.clemson.edu:50555] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1832.palmetto.clemson.edu:23044] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1812.palmetto.clemson.edu:40173] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1820.palmetto.clemson.edu:71032] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1813.palmetto.clemson.edu:96233] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node0145.palmetto.clemson.edu:50385] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1829.palmetto.clemson.edu:76237] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1811.palmetto.clemson.edu:115184] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
[node1876.palmetto.clemson.edu:07860] mca: base: component_find: unable to open /software/openmpi/1.10.7_gcc/lib/openmpi/mca_btl_openib: libibverbs.so.1: cannot open shared object file: No such file or directory (ignored)
-- started at 10/22/2018 15:23:42 --
mdtest-1.9.3 was launched with 48 total task(s) on 48 node(s)
Command line used: /home/jburto2/io-500-dev/bin/mdtest "-C" "-t" "-F" "-w" "3901" "-e" "3901" "-d" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_hard" "-n" "50000" "-x" "/scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46/mdt_hard-stonewall" "-W" "300"
Path: /scratch1b/jburto2/io500/datafiles/io500.2018.10.22-15.05.46
FS: 232.8 TiB Used FS: 20.5% Inodes: 0.0 Mi Used Inodes: -nan%
48 tasks, 2400000 files
stonewall rank 1: 18086 of 18221
Continue stonewall hit min: 18033 max: 18221 avg: 18095.4
stonewall rank 0: 18113 of 18221
stonewall rank 4: 18061 of 18221
stonewall rank 5: 18159 of 18221
stonewall rank 2: 18052 of 18221
stonewall rank 17: 18098 of 18221
stonewall rank 6: 18120 of 18221
stonewall rank 21: 18080 of 18221
stonewall rank 9: 18139 of 18221
stonewall rank 16: 18038 of 18221
stonewall rank 32: 18078 of 18221
stonewall rank 34: 18080 of 18221
stonewall rank 12: 18076 of 18221
stonewall rank 8: 18080 of 18221
stonewall rank 25: 18119 of 18221
stonewall rank 20: 18128 of 18221
stonewall rank 24: 18145 of 18221
stonewall rank 22: 18066 of 18221
stonewall rank 36: 18103 of 18221
stonewall rank 40: 18125 of 18221
stonewall rank 10: 18065 of 18221
stonewall rank 13: 18171 of 18221
stonewall rank 18: 18082 of 18221
stonewall rank 3: 18117 of 18221
stonewall rank 28: 18104 of 18221
stonewall rank 14: 18058 of 18221
stonewall rank 7: 18092 of 18221
stonewall rank 44: 18069 of 18221
stonewall rank 26: 18053 of 18221
stonewall rank 33: 18085 of 18221
stonewall rank 42: 18102 of 18221
stonewall rank 41: 18068 of 18221
stonewall rank 38: 18102 of 18221
stonewall rank 37: 18089 of 18221
stonewall rank 46: 18067 of 18221
stonewall rank 35: 18060 of 18221
stonewall rank 30: 18099 of 18221
stonewall rank 29: 18099 of 18221
stonewall rank 19: 18102 of 18221
stonewall rank 11: 18044 of 18221
stonewall rank 45: 18152 of 18221
stonewall rank 23: 18079 of 18221
stonewall rank 27: 18104 of 18221
stonewall rank 15: 18033 of 18221
stonewall rank 31: 18120 of 18221
stonewall rank 43: 18083 of 18221
stonewall rank 39: 18114 of 18221
SUMMARY rate: (of 1 iterations)
Operation Max Min Mean Std Dev
--------- --- --- ---- -------
File creation : 7937.048 7937.048 7937.048 0.000
File stat : 0.000 0.000 0.000 0.000
File read : 0.000 0.000 0.000 0.000
File removal : 0.000 0.000 0.000 0.000
Tree creation : 135.852 135.852 135.852 0.000
Tree removal : 0.000 0.000 0.000 0.000
-- finished at 10/22/2018 15:28:45 --
- result_summary
-
[RESULT] BW phase 1 ior_easy_write 4.430 GB/s : time 322.45 seconds
[RESULT] IOPS phase 1 mdtest_easy_write 103.110 kiops : time 389.29 seconds
[RESULT] BW phase 2 ior_hard_write 3.907 GB/s : time 343.64 seconds
[RESULT] IOPS phase 2 mdtest_hard_write 7.937 kiops : time 319.18 seconds
[RESULT] IOPS phase 3 find 11.770 kiops : time 1812.57 seconds
[RESULT] BW phase 3 ior_easy_read 3.069 GB/s : time 465.40 seconds
[RESULT] IOPS phase 4 mdtest_easy_stat 87.089 kiops : time 248.72 seconds
[RESULT] BW phase 4 ior_hard_read 1.395 GB/s : time 962.56 seconds
[RESULT] IOPS phase 5 mdtest_hard_stat 38.780 kiops : time 24.32 seconds
[RESULT] IOPS phase 6 mdtest_easy_delete 60.609 kiops : time 343.78 seconds
[RESULT] IOPS phase 7 mdtest_hard_read 11.880 kiops : time 90.36 seconds
[RESULT] IOPS phase 8 mdtest_hard_delete 5.376 kiops : time 165.28 seconds
[SCORE] Bandwidth 2.93392 GB/s : IOPS 24.4074 kiops : TOTAL 8.46223